mapped_reads_salmon QC
A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
/Users/jeremy/Desktop/250518_yeast_anaerobic_v_aerobic_expression/mapped_reads_salmon
General Statistics
| Sample Name | % Aligned | M Aligned | Library types | CFR | M Bias |
|---|---|---|---|---|---|
| mapped_reads_salmon | aerobic_r1 | aerobic_r1 | 100.0% | 0.0 | |||
| mapped_reads_salmon | aerobic_r1 | aux_info | aerobic_r1 | 83.9% | 6.1M | ISR | ||
| mapped_reads_salmon | aerobic_r2 | aerobic_r2 | 100.0% | 0.0 | |||
| mapped_reads_salmon | aerobic_r2 | aux_info | aerobic_r2 | 83.9% | 6.1M | ISR | ||
| mapped_reads_salmon | anaerobic_r1 | anaerobic_r1 | 100.0% | 0.0 | |||
| mapped_reads_salmon | anaerobic_r1 | aux_info | anaerobic_r1 | 82.2% | 5.0M | ISR | ||
| mapped_reads_salmon | anaerobic_r2 | anaerobic_r2 | 100.0% | 0.0 | |||
| mapped_reads_salmon | anaerobic_r2 | aux_info | anaerobic_r2 | 82.1% | 5.0M | ISR |
Salmon
1.10.3
Quantifies expression of transcripts using RNA-seq data.URL: https://combine-lab.github.io/salmonDOI: 10.1038/nmeth.4197
Software Versions
Software Versions lists versions of software tools extracted from file contents.
| Software | Version |
|---|---|
| Salmon | 1.10.3 |